C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forty-two-three domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023489 Fyttd1-001 ENSMUSG00000022800 10090 + 16:32877781-32908875 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000023489
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000023489 7.926±1.95 14.864±1.03 13.385±6.66 8.033±0.00 8.356±2.03 5.803±0.71 5.861±1.54 15.708±0.98 10.744±4.52 15.350±5.16 21.921±6.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CE CIL_0006CE_0002 CGP 16:32821703-32908963
CIL_0006C7 CIL_0006C7_0002 CGP 16:32877500-33015647

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003729 ISS mRNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 ISS nucleoplasm
GO:0006406 ISS mRNA export from nucleus
GO:0016607 ISS nuclear speck
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241502 FYTTD1-001 protein_coding Homo_sapiens 0 1461
ENST00000412924 FYTTD1-004 nonsense_mediated_decay Homo_sapiens 0 636
ENST00000415708 FYTTD1-003 protein_coding Homo_sapiens 0 1179
ENST00000418169 FYTTD1-009 nonsense_mediated_decay Homo_sapiens 0 473
ENST00000424384 FYTTD1-006 protein_coding Homo_sapiens 0 1303
ENST00000426031 FYTTD1-005 protein_coding Homo_sapiens 0 392
ENST00000428738 FYTTD1-007 protein_coding Homo_sapiens 0 787
ENST00000494309 FYTTD1-002 nonsense_mediated_decay Homo_sapiens 0 372

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