C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leishmanolysin-like (metallopeptidase M8 family)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023497 Lmln-001 ENSMUSG00000022802 10090 + 16:33062521-33127695 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023497
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023497 0.808±0.31 5.159±0.91 0.552±0.10 1.937±0.19 0.604±0.24 0.828±0.26 0.422±0.14 1.298±0.15 0.458±0.15 1.084±0.14 0.646±0.12 1.912±0.62 1.169±0.25 2.662±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CA CIL_0006CA_0002 CGP 16:33056453-33127695
CIL_0006Q0 CIL_0006Q0_0002 CGP 16:33062521-33243311

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004222 IEA metalloendopeptidase activity
GO:0005737 IEA cytoplasm
GO:0005811 IEA lipid particle
GO:0005925 IEA focal adhesion
GO:0006508 IEA proteolysis
GO:0007067 IEA mitotic nuclear division
GO:0007155 IEA cell adhesion
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330198 LMLN-001 protein_coding Homo_sapiens 0 1157
ENST00000332636 LMLN-005 protein_coding Homo_sapiens 0 1048
ENST00000420910 LMLN-004 protein_coding Homo_sapiens 0 2039
ENST00000448030 RP11-533K9.3-001 unprocessed_pseudogene Homo_sapiens 0 424
ENST00000451139 LMLN-003 retained_intron Homo_sapiens 0 1727
ENST00000473676 LMLN-011 retained_intron Homo_sapiens 0 678
ENST00000482695 LMLN-002 protein_coding Homo_sapiens 0 1940

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