C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 10B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023732 Wnt10b-201 ENSMUSG00000022996 10090 - 15:98771753-98778150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023732
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023732 0.538±0.10 0.362±0.20 0.472±0.00 0.261±0.00 1.829±0.81 0.138±0.04 0.042±0.00 0.081±0.03 0.029±0.01 2.471±0.00 0.199±0.09 14.831±6.11 0.331±0.30 0.058±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000G CIL_00000G_0002 CGP 15:98737621-98778150
CIL_00033L CIL_00033L_0003 CGP 15:98771753-98793837

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 IGI G2/M transition of mitotic cell cycle
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0002062 IEA chondrocyte differentiation
GO:0005102 TAS receptor binding
GO:0005109 IBA frizzled binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006629 IMP lipid metabolic process
GO:0007050 IDA cell cycle arrest
GO:0007165 TAS signal transduction
GO:0007224 IDA smoothened signaling pathway
GO:0007267 TAS cell-cell signaling
GO:0008284 IDA positive regulation of cell proliferation
GO:0009887 TAS organ morphogenesis
GO:0010971 IDA positive regulation of G2/M transition of mitotic cell cycle
GO:0014835 IMP myoblast differentiation involved in skeletal muscle regeneration
GO:0016055 IGI Wnt signaling pathway
GO:0030182 IBA neuron differentiation
GO:0030501 IDA positive regulation of bone mineralization
GO:0030858 IDA positive regulation of epithelial cell differentiation
GO:0032434 IDA regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043065 IEA positive regulation of apoptotic process
GO:0043403 IMP skeletal muscle tissue regeneration
GO:0045165 IBA cell fate commitment
GO:0045598 IMP regulation of fat cell differentiation
GO:0045599 IDA negative regulation of fat cell differentiation
GO:0045669 IDA positive regulation of osteoblast differentiation
GO:0045778 IMP positive regulation of ossification
GO:0045899 IDA positive regulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048641 IMP regulation of skeletal muscle tissue development
GO:0048741 IMP skeletal muscle fiber development
GO:0050680 IDA negative regulation of epithelial cell proliferation
GO:0050821 IEA protein stabilization
GO:0050909 IMP sensory perception of taste
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051246 IMP regulation of protein metabolic process
GO:0051885 IDA positive regulation of anagen
GO:0060070 IDA canonical Wnt signaling pathway
GO:0060346 IMP bone trabecula formation
GO:0061196 IMP fungiform papilla development
GO:0071310 IDA cellular response to organic substance
GO:0071320 IDA cellular response to cAMP
GO:0071374 IDA cellular response to parathyroid hormone stimulus
GO:0071407 IDA cellular response to organic cyclic compound
GO:0071425 IDA hematopoietic stem cell proliferation
GO:0071464 IEA cellular response to hydrostatic pressure
GO:0090263 IDA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301061 WNT10B-001 protein_coding Homo_sapiens 0 1895
ENST00000403957 WNT10B-002 protein_coding Homo_sapiens 0 787
ENST00000407467 WNT10B-003 protein_coding Homo_sapiens 0 761
ENST00000413630 WNT10B-006 protein_coding Homo_sapiens 0 512
ENST00000420388 WNT10B-004 protein_coding Homo_sapiens 0 457
ENST00000475740 WNT10B-005 retained_intron Homo_sapiens 0 457

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