C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific methyltransferase 2D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023741 Kmt2d-001 ENSMUSG00000048154 10090 - 15:98831672-98871204 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023741
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023741 2.819±1.25 5.570±2.02 4.591±2.08 5.939±2.91 4.853±3.48 3.122±1.23 2.022±0.47 2.648±0.80 1.700±0.79 6.651±1.60 3.041±1.35 7.152±4.13 3.918±1.58 2.884±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000J CIL_00000J_0002 CGP 15:98812798-98871204
CIL_00003S CIL_00003S_0002 CGP 15:98831669-98881404

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008284 IEA positive regulation of cell proliferation
GO:0033148 IEA positive regulation of intracellular estrogen receptor signaling pathway
GO:0035097 IEA histone methyltransferase complex
GO:0043627 IEA response to estrogen
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000053863 kmt2d-201 protein_coding Danio_rerio 0 732
ENSDART00000141458 kmt2d-001 protein_coding Danio_rerio 0 549
ENSDART00000137010 kmt2ca-001 protein_coding Danio_rerio 0 243
ENST00000301067 KMT2D-001 protein_coding Homo_sapiens 0 7993
ENST00000526209 KMT2D-002 protein_coding Homo_sapiens 0 1053
ENST00000547610 KMT2D-007 protein_coding Homo_sapiens 0 743
ENST00000548065 PRKAG1-001 protein_coding Homo_sapiens 0 368
ENST00000549799 KMT2D-006 processed_transcript Homo_sapiens 0 411
ENST00000552391 KMT2D-004 retained_intron Homo_sapiens 0 228

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