C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 52
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023920 Tmem52-001 ENSMUSG00000023153 10090 + 4:155469131-155470857 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023920
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023920 0.507±0.17 26.183±13.48 0.458±0.25 0.072±0.02 5.838±6.40 0.561±0.20 2.899±0.68 0.104±0.07 0.731±0.15 23.765±5.11 3.157±0.98 0.121±0.00 4.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310991 TMEM52-001 protein_coding Homo_sapiens 0 449
ENST00000378598 TMEM52-005 protein_coding Homo_sapiens 4e-24 115
ENST00000416272 TMEM52-002 protein_coding Homo_sapiens 7e-35 150
ENST00000470931 TMEM52-003 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000602604 TMEM52-006 retained_intron Homo_sapiens 3e-32 143

Loading