C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: radial spoke head 9 homolog (Chlamydomonas)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024762 Rsph9-001 ENSMUSG00000023966 10090 - 17:46129271-46144216 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024762
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024762 3.506±2.62 6.117±2.01 6.756±2.19 13.750±0.43 2.814±1.13 3.265±1.36 0.866±0.37 13.968±0.92 0.565±0.24 11.074±4.28 0.279±0.11 12.812±3.86 0.558±0.25 106.694±23.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190
CIL_00049T CIL_00049T_0002 CGP 17:46016993-46128910
CIL_0006UL CIL_0006UL_0002 CGP 17:46110986-46144216

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003341 IGI cilium movement
GO:0003674 ND molecular_function
GO:0005856 IEA cytoskeleton
GO:0005930 IC axoneme
GO:0031514 IC motile cilium
GO:0035082 IGI axoneme assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372163 RSPH9-002 protein_coding Homo_sapiens 0 1014
ENST00000372165 RSPH9-001 protein_coding Homo_sapiens 0 466

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