C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: luteinizing hormone/choriogonadotropin receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024916 Lhcgr-201 ENSMUSG00000024107 10090 - 17:88741549-88791976 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024916
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024916 0.106±0.02 0.177±0.09 0.006±0.00 0.100±0.06 0.081±0.04 0.011±0.00 0.017±0.01 0.003±0.00 0.087±0.01 0.017±0.00 60.838±36.63 0.005±0.00 0.677±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LM CIL_0003LM_0002 CGP 17:88668660-88791976
CIL_0003C0 CIL_0003C0_0002 CGP 17:88741549-89200612

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001541 IMP ovarian follicle development
GO:0004964 TAS luteinizing hormone receptor activity
GO:0005887 IDA integral component of plasma membrane
GO:0007190 IDA activation of adenylate cyclase activity
GO:0007200 IDA phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0007283 IMP spermatogenesis
GO:0008584 IMP male gonad development
GO:0008585 IMP female gonad development
GO:0022602 IMP ovulation cycle process
GO:0032962 IDA positive regulation of inositol trisphosphate biosynthetic process
GO:0035472 IDA choriogonadotropin hormone receptor activity
GO:0038106 IDA choriogonadotropin hormone binding
GO:0042700 IEA luteinizing hormone signaling pathway
GO:0043950 IDA positive regulation of cAMP-mediated signaling
GO:0046544 IMP development of secondary male sexual characteristics
GO:0060065 IMP uterus development
GO:0071371 IDA cellular response to gonadotropin stimulus
GO:0072520 IMP seminiferous tubule development
GO:0090030 IMP regulation of steroid hormone biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294954 LHCGR-001 protein_coding Homo_sapiens 0 1999
ENST00000401907 LHCGR-006 protein_coding Homo_sapiens 0 887
ENST00000403273 LHCGR-004 protein_coding Homo_sapiens 0 885
ENST00000405626 LHCGR-003 protein_coding Homo_sapiens 0 1116
ENST00000428232 LHCGR-007 protein_coding Homo_sapiens 0 496
ENST00000602369 RP11-310N16.1-001 nonsense_mediated_decay Homo_sapiens 0 473

Loading