C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glial cell line derived neurotrophic factor family receptor alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025224 Gfra3-201 ENSMUSG00000024366 10090 - 18:34689903-34720387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025224
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025224 1.240±0.20 2.978±1.10 4.828±0.74 0.274±0.18 1.567±0.43 3.175±0.45 2.311±0.48 0.499±0.06 0.026±0.02 0.790±0.07 0.061±0.03 0.726±0.34 0.870±0.77 0.197±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D9 CIL_0005D9_0002 CGP 18:34630951-34720387
CIL_0005D8 CIL_0005D8_0002 CGP 18:34689903-34751533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007169 TAS transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007411 IMP axon guidance
GO:0008046 IMP axon guidance receptor activity
GO:0009897 IDA external side of plasma membrane
GO:0015026 TAS coreceptor activity
GO:0031225 IEA anchored component of membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0048485 IMP sympathetic nervous system development
GO:0048666 IMP neuron development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274721 GFRA3-001 protein_coding Homo_sapiens 0 1138
ENST00000378362 GFRA3-002 protein_coding Homo_sapiens 0 745

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