C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adducin 3 (gamma)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025999 Add3-201 ENSMUSG00000025026 10090 + 19:53143997-53247399 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverOvaryTestisENSMUST00000025999
Transcript ID Breast Kidney Liver Ovary Testis
ENSMUST00000025999 6.810±0.00 5.317±0.96 1.153±0.43 4.303±2.41 3.963±1.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FE CIL_0006FE_0002 CGP 19:52943417-53247399
CIL_00038Y CIL_00038Y_0003 CGP 19:53140445-53375810

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000794 IDA condensed nuclear chromosome
GO:0003779 IEA actin binding
GO:0005198 IDA structural molecule activity
GO:0005516 IEA calmodulin binding
GO:0005737 IDA cytoplasm
GO:0005856 IDA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005938 IDA cell cortex
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277900 ADD3-002 protein_coding Homo_sapiens 0 1936
ENST00000356080 ADD3-001 protein_coding Homo_sapiens 0 2542
ENST00000360162 ADD3-003 protein_coding Homo_sapiens 0 1936
ENST00000468251 ADD3-007 processed_transcript Homo_sapiens 0 743
ENST00000468345 ADD3-010 processed_transcript Homo_sapiens 0 675
ENST00000472568 ADD3-018 processed_transcript Homo_sapiens 0 577
ENST00000473669 ADD3-011 processed_transcript Homo_sapiens 0 374
ENST00000475954 ADD3-015 processed_transcript Homo_sapiens 0 375
ENST00000479805 ADD3-021 processed_transcript Homo_sapiens 0 366
ENST00000484622 ADD3-005 processed_transcript Homo_sapiens 0 377
ENST00000487085 ADD3-013 processed_transcript Homo_sapiens 0 239
ENST00000488799 ADD3-020 processed_transcript Homo_sapiens 0 350
ENST00000492162 ADD3-019 processed_transcript Homo_sapiens 0 191
ENST00000495661 ADD3-009 processed_transcript Homo_sapiens 0 239
ENST00000496517 ADD3-008 processed_transcript Homo_sapiens 0 688
ENST00000497125 ADD3-014 processed_transcript Homo_sapiens 0 531
ENST00000611329 ADD3-201 protein_coding Homo_sapiens 0 1903

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