C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026480 Ttc4-001 ENSMUSG00000025413 10090 - 4:106662256-106678944 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026480
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026480 13.884±3.53 8.473±3.97 11.649±0.05 14.263±6.90 11.394±1.29 11.986±3.39 8.491±0.40 14.123±1.63 11.747±2.89 8.538±1.62 15.070±1.42 11.792±5.15 18.175±5.06 11.504±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0002 VISTA 4:106564211-107167561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371281 TTC4-001 protein_coding Homo_sapiens 0 1182
ENST00000371284 TTC4-002 processed_transcript Homo_sapiens 0 1096
ENST00000414150 MROH7-TTC4-004 nonsense_mediated_decay Homo_sapiens 0 1092
ENST00000425300 MROH7-TTC4-002 nonsense_mediated_decay Homo_sapiens 0 1092
ENST00000427137 TTC4P1-001 processed_pseudogene Homo_sapiens 0 1003
ENST00000460155 MROH7-TTC4-003 retained_intron Homo_sapiens 0 1092
ENST00000486621 TTC4-004 retained_intron Homo_sapiens 0 429
ENST00000606515 MROH7-TTC4-001 nonsense_mediated_decay Homo_sapiens 0 704

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