C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: muskelin 1, intracellular mediator containing kelch motifs
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026699 Mkln1-001 ENSMUSG00000025609 10090 + 6:31398735-31516811 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026699
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026699 3.035±0.85 1.600±0.29 4.778±0.26 7.371±0.93 2.866±0.21 1.598±0.42 1.965±0.14 3.290±0.31 2.177±0.70 4.486±0.36 3.740±0.68 2.409±0.47 1.921±1.15 1.290±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GU CIL_0002GU_0002 CGP 6:30956023-31516811
CIL_00024O CIL_00024O_0003 CGP 6:31398735-31563981

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000352689 MKLN1-001 protein_coding Homo_sapiens 0 3280
ENST00000416992 MKLN1-013 protein_coding Homo_sapiens 0 821
ENST00000421797 MKLN1-012 protein_coding Homo_sapiens 0 3094
ENST00000429546 MKLN1-014 protein_coding Homo_sapiens 0 778
ENST00000446815 MKLN1-007 protein_coding Homo_sapiens 0 616
ENST00000458153 MKLN1-003 nonsense_mediated_decay Homo_sapiens 0 3223
ENST00000468830 MKLN1-011 retained_intron Homo_sapiens 0 278
ENST00000494286 MKLN1-008 processed_transcript Homo_sapiens 0 601
ENST00000494785 MKLN1-002 retained_intron Homo_sapiens 0 3055
ENST00000496815 MKLN1-009 processed_transcript Homo_sapiens 7.00649e-43 178
ENST00000497746 MKLN1-010 retained_intron Homo_sapiens 0 564
ENST00000498778 MKLN1-006 processed_transcript Homo_sapiens 0 676

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