C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: REV1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027251 Rev1-201 ENSMUSG00000026082 10090 - 1:38052787-38129662 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027251 3.368±1.34 2.340±0.82 7.228±0.23 9.785±0.57 2.500±0.56 1.825±0.32 2.357±0.25 2.343±0.77 5.561±3.14 2.299±0.49 5.394±0.58 5.307±2.77 6.111±0.53 9.122±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000348 CIL_000348_0002 CGP 1:37983867-38055579
CIL_000347 CIL_000347_0002 CGP 1:37998010-38129662
CIL_0007N7 CIL_0007N7_0003 UCNEbase 1:38052781-38449781
CIL_000346 CIL_000346_0002 CGP 1:38052787-38664955

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0003684 IEA damaged DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0009411 IEA response to UV
GO:0017125 IDA deoxycytidyl transferase activity
GO:0042276 IDA error-prone translesion synthesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258428 REV1-001 protein_coding Homo_sapiens 0 4420
ENST00000289371 EIF5B-001 protein_coding Homo_sapiens 0 521
ENST00000393445 REV1-002 protein_coding Homo_sapiens 0 4401
ENST00000413697 REV1-003 nonsense_mediated_decay Homo_sapiens 0 3450
ENST00000438366 REV1-012 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000450415 REV1-007 protein_coding Homo_sapiens 0 599
ENST00000465835 REV1-005 processed_transcript Homo_sapiens 0 3229
ENST00000473819 REV1-004 retained_intron Homo_sapiens 0 1325
ENST00000477121 REV1-013 retained_intron Homo_sapiens 0 340
ENST00000481719 REV1-010 retained_intron Homo_sapiens 0 381
ENST00000482595 REV1-011 processed_transcript Homo_sapiens 0 508
ENST00000482887 REV1-006 processed_transcript Homo_sapiens 0 252
ENST00000485487 REV1-015 retained_intron Homo_sapiens 0 460
ENST00000486117 REV1-009 processed_transcript Homo_sapiens 0 580
ENST00000491752 REV1-008 retained_intron Homo_sapiens 0 261

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