C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 23 (nucleobase transporters), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027405 Slc23a3-001 ENSMUSG00000026205 10090 - 1:75125541-75133890 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027405
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027405 0.237±0.16 0.219±0.05 0.492±0.08 0.076±0.07 0.190±0.08 1.395±0.43 0.442±0.14 7.609±2.74 0.661±0.57 0.571±0.21 0.045±0.01 1.130±0.55 5.470±5.85 0.031±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EF CIL_0006EF_0002 CGP 1:74967139-75133890
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006EE CIL_0006EE_0002 CGP 1:75125541-75142711

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005215 IEA transporter activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295738 SLC23A3-001 protein_coding Homo_sapiens 0 568
ENST00000318673 SLC23A3-003 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000409370 SLC23A3-008 protein_coding Homo_sapiens 0 630
ENST00000409878 SLC23A3-010 protein_coding Homo_sapiens 0 1602
ENST00000414999 SLC23A3-011 nonsense_mediated_decay Homo_sapiens 0 483
ENST00000430764 SLC23A3-007 protein_coding Homo_sapiens 0 248
ENST00000455516 SLC23A3-005 protein_coding Homo_sapiens 0 1507
ENST00000465580 SLC23A3-009 retained_intron Homo_sapiens 0 433
ENST00000497918 SLC23A3-002 retained_intron Homo_sapiens 0 412
ENST00000498327 SLC23A3-012 retained_intron Homo_sapiens 0 407

Loading