C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cDNA sequence BC005624
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028205 BC005624-001 ENSMUSG00000026851 10090 - 2:30972833-30981941 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028205
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028205 14.446±1.30 5.953±3.67 40.322±3.24 67.189±40.55 7.837±3.30 6.683±1.42 12.549±0.83 19.857±2.02 20.239±11.22 19.855±2.67 15.765±1.23 22.899±26.94 40.615±17.05 26.519±18.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UA CIL_0005UA_0002 CGP 2:30960627-30982201
CIL_0002M0 CIL_0002M0_0003 CGP 2:30972833-31023586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000015076 C5H9orf78-201 protein_coding Danio_rerio 0 329
ENST00000372447 C9orf78-007 protein_coding Homo_sapiens 0 1016
ENST00000461349 C9orf78-006 processed_transcript Homo_sapiens 0 545
ENST00000461539 C9orf78-004 processed_transcript Homo_sapiens 0 675
ENST00000461762 C9orf78-002 processed_transcript Homo_sapiens 0 721
ENST00000480023 C9orf78-001 processed_transcript Homo_sapiens 0 326
ENST00000492991 C9orf78-005 processed_transcript Homo_sapiens 0 357
ENST00000495934 C9orf78-003 processed_transcript Homo_sapiens 5.00264e-43 178
ENST00000615599 C9orf78-201 protein_coding Homo_sapiens 0 1003

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