C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 6 interacting protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028336 Arl6ip6-001 ENSMUSG00000026960 10090 + 2:53192088-53219220 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028336
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028336 2.417±0.73 12.496±2.90 3.956±0.26 7.649±5.44 4.718±3.24 6.447±1.60 1.820±0.70 2.048±0.75 9.153±7.83 4.516±1.24 1.363±0.56 9.509±5.04 5.884±3.47 10.871±7.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DS CIL_0007DS_0002 CGP 2:53134704-53219220
CIL_0007DR CIL_0007DR_0002 CGP 2:53191726-54085552

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326446 ARL6IP6-001 protein_coding Homo_sapiens 0 678
ENST00000425034 ARL6IP6-004 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000455875 ARL6IP6-003 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000463690 ARL6IP6-005 processed_transcript Homo_sapiens 0 398
ENST00000495469 ARL6IP6-002 processed_transcript Homo_sapiens 0 398
ENST00000520293 RP11-775E10.1-001 processed_pseudogene Homo_sapiens 0 272

Loading