C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome b reductase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028403 Cybrd1-001 ENSMUSG00000027015 10090 + 2:71117923-71142926 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028403
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028403 2.028±1.44 0.241±0.07 1.534±0.07 2.115±1.88 0.180±0.03 1.446±0.24 0.798±0.05 0.197±0.07 0.567±0.52 5.984±0.67 0.110±0.04 4.985±1.75 0.642±0.42 1.147±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IN CIL_0003IN_0003 CGP 2:71055328-71142926
CIL_0002PU CIL_0002PU_0002 CGP 2:71117923-71263303

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000293 IEA ferric-chelate reductase activity
GO:0010039 IDA response to iron ion
GO:0016021 IEA integral component of membrane
GO:0031526 IDA brush border membrane
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187762 TMEM38A-001 protein_coding Homo_sapiens 0.000000000003 79
ENST00000258149 MDM2-001 protein_coding Homo_sapiens 0.0008 53
ENST00000321348 CYBRD1-001 protein_coding Homo_sapiens 0 730
ENST00000375252 CYBRD1-003 protein_coding Homo_sapiens 0 255
ENST00000376585 MTHFR-007 protein_coding Homo_sapiens 0.00003 57
ENST00000423400 MTHFR-005 protein_coding Homo_sapiens 0.000008 57
ENST00000431243 MTHFR-006 protein_coding Homo_sapiens 0.000004 57
ENST00000468308 CYBRD1-004 processed_transcript Homo_sapiens 0 512
ENST00000474014 TACC2-025 retained_intron Homo_sapiens 0.0001 53
ENST00000474182 CYBRD1-005 processed_transcript Homo_sapiens 0 254
ENST00000483837 POLR3H-002 retained_intron Homo_sapiens 0.000009 57
ENST00000494587 CYBRD1-006 processed_transcript Homo_sapiens 0 254
ENST00000504256 ANAPC4-003 retained_intron Homo_sapiens 0.000005 58
ENST00000511366 TRMT44-007 processed_transcript Homo_sapiens 0.00008 55
ENST00000585170 SEPT4-015 retained_intron Homo_sapiens 0.000005 58

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