C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxysteroid (17-beta) dehydrogenase 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028619 Hsd17b12-001 ENSMUSG00000027195 10090 - 2:94032689-94157964 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028619
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028619 51.916±8.72 14.131±0.70 29.472±5.70 26.971±5.12 26.330±6.48 14.162±6.79 6.325±1.09 14.532±1.84 25.879±10.76 20.997±1.27 1.967±0.58 16.425±5.08 37.968±13.09 4.953±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000184 CIL_000184_0002 CGP 2:94032689-94406689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001968 IDA fibronectin binding
GO:0004303 IEA estradiol 17-beta-dehydrogenase activity
GO:0005515 IEA protein binding
GO:0005518 IDA collagen binding
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0006703 IEA estrogen biosynthetic process
GO:0008201 IDA heparin binding
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0016021 IEA integral component of membrane
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278353 HSD17B12-001 protein_coding Homo_sapiens 0 946
ENST00000421090 RP5-984P4.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000428694 RP5-933K21.2-001 processed_pseudogene Homo_sapiens 0 737
ENST00000527213 HSD17B12-014 processed_transcript Homo_sapiens 0 505
ENST00000533090 HSD17B12-004 retained_intron Homo_sapiens 0 449
ENST00000533802 HSD17B12-005 processed_transcript Homo_sapiens 0 403
ENST00000534053 HSD17B12-006 retained_intron Homo_sapiens 0 263

Loading