C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exostoses (multiple) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028623 Ext2-001 ENSMUSG00000027198 10090 - 2:93695631-93822568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028623
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028623 26.901±4.94 22.971±2.98 16.324±0.61 11.995±3.24 17.806±4.77 19.336±0.83 11.064±0.43 18.515±1.70 8.947±0.97 25.259±0.62 7.747±0.80 31.830±5.40 36.617±16.85 4.506±2.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UN CIL_0008UN_0002 VISTA 2:93370139-93973617

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IC Golgi membrane
GO:0001503 IEA ossification
GO:0001707 IMP mesoderm formation
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IC endoplasmic reticulum membrane
GO:0005794 IDA Golgi apparatus
GO:0006024 IEA glycosaminoglycan biosynthetic process
GO:0006486 IEA protein glycosylation
GO:0008375 IDA acetylglucosaminyltransferase activity
GO:0015012 IMP heparan sulfate proteoglycan biosynthetic process
GO:0015014 IEA heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0015020 IDA glucuronosyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030154 IMP cell differentiation
GO:0031227 IEA intrinsic component of endoplasmic reticulum membrane
GO:0033692 IEA cellular polysaccharide biosynthetic process
GO:0042328 IC heparan sulfate N-acetylglucosaminyltransferase activity
GO:0042803 IDA protein homodimerization activity
GO:0046982 IEA protein heterodimerization activity
GO:0050508 IC glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0050509 IC N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079165 ext2-001 protein_coding Danio_rerio 0 990
ENST00000343631 EXT2-005 protein_coding Homo_sapiens 0 2569
ENST00000358681 EXT2-002 protein_coding Homo_sapiens 0 1375
ENST00000395673 EXT2-201 protein_coding Homo_sapiens 0 2569
ENST00000527014 EXT2-007 protein_coding Homo_sapiens 0 388
ENST00000528159 EXT2-009 processed_transcript Homo_sapiens 0 468
ENST00000531161 EXT2-011 processed_transcript Homo_sapiens 0 326
ENST00000533608 EXT2-001 protein_coding Homo_sapiens 0 2628
ENST00000534048 EXT2-010 retained_intron Homo_sapiens 0 540

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