C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein, RP/EB family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028981 Mapre1-001 ENSMUSG00000027479 10090 + 2:153741274-153773310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028981
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028981 10.031±1.84 5.489±0.60 14.814±0.97 13.608±7.22 7.572±0.77 8.332±0.44 4.525±0.14 6.629±0.61 6.854±5.35 10.463±0.46 4.316±0.64 10.923±3.08 12.530±6.32 4.741±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0002 VISTA 2:153181176-153785061
CIL_0008NQ CIL_0008NQ_0002 VISTA 2:153260290-153861940
CIL_0008QN CIL_0008QN_0002 VISTA 2:153551282-154154369
CIL_0001KC CIL_0001KC_0002 CGP 2:153649450-153773310

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005813 IEA centrosome
GO:0005819 ISS spindle
GO:0005874 ISS microtubule
GO:0005881 IDA cytoplasmic microtubule
GO:0007067 IEA mitotic nuclear division
GO:0015630 IDA microtubule cytoskeleton
GO:0030981 ISS cortical microtubule cytoskeleton
GO:0031115 ISS negative regulation of microtubule polymerization
GO:0031253 IDA cell projection membrane
GO:0035371 IDA microtubule plus-end
GO:0035372 ISS protein localization to microtubule
GO:0042995 IDA cell projection
GO:0044822 IEA poly(A) RNA binding
GO:0051010 ISS microtubule plus-end binding
GO:1903033 IDA positive regulation of microtubule plus-end binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375571 MAPRE1-001 protein_coding Homo_sapiens 0 1868
ENST00000506459 RP11-141P6.1-001 processed_pseudogene Homo_sapiens 0 839
ENST00000522077 MAPRE1P1-001 processed_pseudogene Homo_sapiens 0 917

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