C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major facilitator superfamily domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029344 Mfsd1-201 ENSMUSG00000027775 10090 + 3:67582768-67604231 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029344
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029344 25.584±8.98 85.246±25.09 20.382±1.54 7.159±4.31 35.175±17.26 31.804±11.34 6.813±1.59 125.692±29.51 31.680±20.23 37.656±13.35 5.992±0.40 44.445±20.71 29.771±23.69 3.872±1.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000808 CIL_000808_0002 VISTA 3:67009670-67610443
CIL_000815 CIL_000815_0002 VISTA 3:67040647-67641402
CIL_000937 CIL_000937_0002 VISTA 3:67250193-67852228
CIL_0004JT CIL_0004JT_0003 CGP 3:67478886-67604231
CIL_0007F0 CIL_0007F0_0002 CGP 3:67582768-68056593

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264266 MFSD1-018 protein_coding Homo_sapiens 0 1465
ENST00000392813 MFSD1-201 protein_coding Homo_sapiens 0 1110
ENST00000415822 MFSD1-001 protein_coding Homo_sapiens 0 1465
ENST00000465235 MFSD1-006 retained_intron Homo_sapiens 0 307
ENST00000465624 MFSD1-016 retained_intron Homo_sapiens 0 715
ENST00000465739 MFSD1-012 protein_coding Homo_sapiens 0 241
ENST00000468409 MFSD1-017 retained_intron Homo_sapiens 0 226
ENST00000471266 MFSD1-007 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000471500 MFSD1-005 nonsense_mediated_decay Homo_sapiens 0 1352
ENST00000474670 MFSD1-008 protein_coding Homo_sapiens 0 571
ENST00000476860 MFSD1-010 retained_intron Homo_sapiens 0 536
ENST00000477743 MFSD1-015 protein_coding Homo_sapiens 0 361
ENST00000480292 MFSD1-003 nonsense_mediated_decay Homo_sapiens 0 1029
ENST00000482835 MFSD1-009 protein_coding Homo_sapiens 0 361
ENST00000484166 MFSD1-002 nonsense_mediated_decay Homo_sapiens 0 1110
ENST00000486568 MFSD1-013 protein_coding Homo_sapiens 0 331
ENST00000489639 MFSD1-014 retained_intron Homo_sapiens 0 340
ENST00000576210 MFSD1P1-001 processed_pseudogene Homo_sapiens 0 878
ENST00000622669 MFSD1-202 protein_coding Homo_sapiens 0 1465

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