C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G-protein signalling modulator 2 (AGS3-like, C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029482 Gpsm2-001 ENSMUSG00000027883 10090 - 3:108678638-108722309 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029482
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029482 3.948±2.69 1.684±0.00 7.757±1.31 6.308±0.24 2.210±0.52 8.157±1.12 1.743±0.00 8.454±6.57 3.210±0.55 0.913±0.00 3.364±0.90 7.984±3.05 2.744±2.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500
CIL_000761 CIL_000761_0002 CGP 3:108678638-108782296

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000132 IMP establishment of mitotic spindle orientation
GO:0005092 IEA GDP-dissociation inhibitor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008277 IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0030695 IEA GTPase regulator activity
GO:0045177 IDA apical part of cell
GO:0050790 IEA regulation of catalytic activity
GO:0060487 IMP lung epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264126 GPSM2-201 protein_coding Homo_sapiens 0 2464
ENST00000406462 GPSM2-001 protein_coding Homo_sapiens 0 2464
ENST00000435475 GPSM2-004 protein_coding Homo_sapiens 0 603
ENST00000435987 GPSM2-002 protein_coding Homo_sapiens 0 817
ENST00000441735 GPSM2-003 protein_coding Homo_sapiens 0 507
ENST00000446797 GPSM2-005 protein_coding Homo_sapiens 0 514

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