C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700013F07 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029485 1700013F07Rik-001 ENSMUSG00000027886 10090 + 3:108537541-108544723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000029485
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000029485 0.112±0.04 0.073±0.01 0.702±0.18 0.147±0.01 0.182±0.08 0.211±0.12 0.117±0.05 0.043±0.03 2.863±0.87 2.205±1.02 0.009±0.00 280.016±113.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369942 C1orf194-006 retained_intron Homo_sapiens 0 215
ENST00000369945 C1orf194-002 protein_coding Homo_sapiens 0 348
ENST00000369948 C1orf194-001 protein_coding Homo_sapiens 0 436
ENST00000369949 C1orf194-004 protein_coding Homo_sapiens 0 420

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