C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 16 (monocarboxylic acid transporters), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029502 Slc16a4-001 ENSMUSG00000027896 10090 + 3:107291230-107312115 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029502
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029502 0.636±0.42 0.507±0.00 0.264±0.11 0.177±0.08 23.999±2.04 0.037±0.00 0.254±0.09 0.247±0.00 0.772±0.40 4.429±4.28 0.248±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075S CIL_00075S_0002 CGP 3:107278858-107312115
CIL_00075R CIL_00075R_0002 CGP 3:107291230-107333289

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369779 SLC16A4-001 protein_coding Homo_sapiens 0 1443
ENST00000369781 SLC16A4-004 protein_coding Homo_sapiens 0 636
ENST00000437429 SLC16A4-201 protein_coding Homo_sapiens 0 941
ENST00000461647 SLC16A4-003 nonsense_mediated_decay Homo_sapiens 0 492
ENST00000467986 SLC16A4-007 protein_coding Homo_sapiens 0 568
ENST00000472422 SLC16A4-002 protein_coding Homo_sapiens 0 1027
ENST00000492412 SLC16A4-008 nonsense_mediated_decay Homo_sapiens 0 1171
ENST00000528649 SLC16A4-006 nonsense_mediated_decay Homo_sapiens 0 941
ENST00000541986 SLC16A4-202 protein_coding Homo_sapiens 0 1182

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