C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030121 B4galt1-001 ENSMUSG00000028413 10090 - 4:40804602-40854005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030121
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030121 24.571±4.67 29.859±4.94 28.532±1.07 1.226±0.72 28.875±3.26 32.854±2.25 19.470±1.26 11.130±0.33 14.694±2.27 28.452±2.67 6.292±0.77 32.824±10.71 35.394±12.54 4.420±1.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061E CIL_00061E_0002 CGP 4:40736542-40854005
CIL_0006YC CIL_0006YC_0002 CGP 4:40804602-40931395

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000138 IEA Golgi trans cisterna
GO:0002064 IMP epithelial cell development
GO:0002526 IMP acute inflammatory response
GO:0003831 IMP beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0003945 IEA N-acetyllactosamine synthase activity
GO:0004461 IEA lactose synthase activity
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005989 IMP lactose biosynthetic process
GO:0006012 IDA galactose metabolic process
GO:0006486 IMP protein glycosylation
GO:0006487 ISS protein N-linked glycosylation
GO:0007155 IGI cell adhesion
GO:0007339 IPI binding of sperm to zona pellucida
GO:0007341 IMP penetration of zona pellucida
GO:0008092 IDA cytoskeletal protein binding
GO:0008285 IGI negative regulation of cell proliferation
GO:0008378 IDA galactosyltransferase activity
GO:0009101 IMP glycoprotein biosynthetic process
GO:0009312 IDA oligosaccharide biosynthetic process
GO:0009897 IEA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0030057 IEA desmosome
GO:0030112 IEA glycocalyx
GO:0030145 ISS manganese ion binding
GO:0030198 IMP extracellular matrix organization
GO:0030879 IMP mammary gland development
GO:0031526 IEA brush border membrane
GO:0035250 IEA UDP-galactosyltransferase activity
GO:0042060 IMP wound healing
GO:0042127 IMP regulation of cell proliferation
GO:0042803 IEA protein homodimerization activity
GO:0043014 IEA alpha-tubulin binding
GO:0043065 IMP positive regulation of apoptotic process
GO:0045136 IMP development of secondary sexual characteristics
GO:0048487 IEA beta-tubulin binding
GO:0048754 IMP branching morphogenesis of an epithelial tube
GO:0050900 IMP leukocyte migration
GO:0051270 IDA regulation of cellular component movement
GO:0060046 IMP regulation of acrosome reaction
GO:0060054 IMP positive regulation of epithelial cell proliferation involved in wound healing
GO:0060055 IMP angiogenesis involved in wound healing
GO:0060058 IMP positive regulation of apoptotic process involved in mammary gland involution
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379731 B4GALT1-001 protein_coding Homo_sapiens 0 1520
ENST00000535206 B4GALT1-201 protein_coding Homo_sapiens 0 701

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