C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030145 Dcaf12-001 ENSMUSG00000028436 10090 - 4:41291300-41314889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030145
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030145 16.832±3.24 17.664±3.41 17.992±1.50 16.811±8.06 17.484±1.02 19.336±3.47 11.851±1.66 15.569±0.39 18.621±10.48 17.669±0.32 10.118±0.48 22.594±3.64 23.196±4.92 23.879±12.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006B3 CIL_0006B3_0002 CGP 4:41194313-41314889
CIL_00004U CIL_00004U_0002 CGP 4:41291300-41390525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0080008 ISS Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361264 DCAF12-001 protein_coding Homo_sapiens 0 2087
ENST00000396990 DCAF12-004 protein_coding Homo_sapiens 0 898
ENST00000450964 DCAF12-003 protein_coding Homo_sapiens 0 752
ENST00000463286 DCAF12-002 processed_transcript Homo_sapiens 0 627
ENST00000466402 DCAF12-005 processed_transcript Homo_sapiens 0 481

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