C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hook homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030306 Hook1-001 ENSMUSG00000028572 10090 + 4:95967240-96025413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030306
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030306 0.735±0.63 0.600±0.00 1.091±0.15 4.251±0.23 0.953±0.05 2.654±0.00 0.491±0.18 2.704±1.13 2.037±0.92 0.982±0.00 2.885±0.48 1.538±0.37 3.864±1.56 27.423±9.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N0 CIL_0008N0_0002 VISTA 4:95521063-96123802
CIL_0001N8 CIL_0001N8_0002 CGP 4:95557507-96025413
CIL_000052 CIL_000052_0003 CGP 4:95967240-96077546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0005874 IEA microtubule
GO:0007032 ISS endosome organization
GO:0007040 ISS lysosome organization
GO:0007275 IEA multicellular organismal development
GO:0007286 IMP spermatid development
GO:0008017 ISO microtubule binding
GO:0008333 ISS endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0015630 IDA microtubule cytoskeleton
GO:0030897 IEA HOPS complex
GO:0042802 IEA identical protein binding
GO:0045022 ISS early endosome to late endosome transport
GO:0070695 ISS FHF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371208 HOOK1-001 protein_coding Homo_sapiens 0 2483
ENST00000455990 HOOK1-003 protein_coding Homo_sapiens 0 532
ENST00000465876 HOOK1-002 processed_transcript Homo_sapiens 0 1749
ENST00000466803 HOOK1-005 processed_transcript Homo_sapiens 0.00002 55

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