C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 2 (facilitated glucose transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030398 Slc2a1-001 ENSMUSG00000028645 10090 + 4:119108711-119137330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030398
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030398 13.037±3.11 19.783±0.38 17.999±2.75 36.277±6.90 21.511±6.46 99.364±14.76 7.361±0.72 40.673±4.67 87.624±99.73 19.922±1.05 3.366±0.44 33.656±13.01 434.861±287.67 3.151±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0002 VISTA 4:118719151-119320076
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001939 IDA female pronucleus
GO:0005355 ISS glucose transmembrane transporter activity
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0005901 IEA caveola
GO:0005911 IEA cell-cell junction
GO:0006461 ISS protein complex assembly
GO:0006970 IEA response to osmotic stress
GO:0015758 IDA glucose transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0019900 IEA kinase binding
GO:0030496 IEA midbody
GO:0030864 ISS cortical actin cytoskeleton
GO:0031982 IDA vesicle
GO:0033300 IDA dehydroascorbic acid transporter activity
GO:0042149 IDA cellular response to glucose starvation
GO:0042802 IEA identical protein binding
GO:0042908 IEA xenobiotic transport
GO:0042910 IEA xenobiotic transporter activity
GO:0043621 ISS protein self-association
GO:0045121 IDA membrane raft
GO:0055056 IDA D-glucose transmembrane transporter activity
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome
GO:0070837 IDA dehydroascorbic acid transport
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013872 slc2a1b-201 protein_coding Danio_rerio 0 673
ENSDART00000137458 slc2a1b-001 protein_coding Danio_rerio 0 673
ENST00000372500 SLC2A1-003 protein_coding Homo_sapiens 0 649
ENST00000426263 SLC2A1-001 protein_coding Homo_sapiens 0 2765
ENST00000439722 SLC2A1-005 protein_coding Homo_sapiens 0 928
ENST00000475162 SLC2A1-006 processed_transcript Homo_sapiens 0 473

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