C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase E (cyclophilin E)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030404 Ppie-001 ENSMUSG00000028651 10090 - 4:123127115-123139951 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030404 10.537±3.44 8.122±1.86 17.028±1.56 11.557±5.69 7.874±2.37 5.682±1.74 7.567±0.91 9.081±0.95 12.616±8.18 7.810±1.85 8.048±1.48 10.371±6.71 15.257±7.23 8.981±2.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N3 CIL_0001N3_0002 CGP 4:123105165-123132099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003723 IEA RNA binding
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0006457 IEA protein folding
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324379 PPIE-001 protein_coding Homo_sapiens 0 1256
ENST00000356511 PPIE-002 protein_coding Homo_sapiens 0 1146
ENST00000372830 PPIE-003 protein_coding Homo_sapiens 0 1127
ENST00000372835 PPIE-007 protein_coding Homo_sapiens 0 848
ENST00000427240 PPIEL-001 unprocessed_pseudogene Homo_sapiens 0 505
ENST00000456578 PPIE-015 retained_intron Homo_sapiens 0 215
ENST00000470018 PPIE-008 protein_coding Homo_sapiens 0 508
ENST00000470213 PPIE-009 protein_coding Homo_sapiens 0 516
ENST00000474804 PPIE-011 nonsense_mediated_decay Homo_sapiens 0 686
ENST00000475350 PPIE-013 nonsense_mediated_decay Homo_sapiens 0 671
ENST00000480169 PPIE-010 processed_transcript Homo_sapiens 0 414
ENST00000482751 PPIE-005 retained_intron Homo_sapiens 0 963
ENST00000485507 PPIE-012 retained_intron Homo_sapiens 0 296
ENST00000495526 PPIE-004 nonsense_mediated_decay Homo_sapiens 0 553
ENST00000497370 PPIE-006 protein_coding Homo_sapiens 0 1086

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