C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G patch domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030662 Gpatch3-001 ENSMUSG00000028850 10090 + 4:133574745-133584243 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030662
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030662 2.329±0.33 4.931±1.56 2.047±0.25 2.493±0.63 1.500±0.86 2.847±0.32 0.787±0.23 2.083±0.43 2.050±0.87 2.488±0.40 0.968±0.25 3.329±0.72 4.215±2.41 3.038±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0002 VISTA 4:133429051-134030305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361720 GPATCH3-001 protein_coding Homo_sapiens 0 1546
ENST00000445019 GPATCH3-003 protein_coding Homo_sapiens 0 235
ENST00000450844 GPATCH3-002 protein_coding Homo_sapiens 0 542

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