C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase, AMP-activated, gamma 2 non-catalytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030784 Prkag2-001 ENSMUSG00000028944 10090 - 5:24862744-25100642 protein_coding

Mus musculus EnsemblGRCm38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030784
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030784 13.540±1.50 6.543±2.17 8.523±0.21 4.473±0.00 6.323±1.85 4.751±0.51 4.222±1.11 12.782±1.93 4.413±2.74 5.631±0.66 0.738±0.22 5.540±1.62 1.861±0.74 39.491±16.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RX CIL_0007RX_0002 VISTA 5:24430554-25031843
CIL_0007T7 CIL_0007T7_0002 VISTA 5:24699254-25303507
CIL_0007T1 CIL_0007T1_0002 VISTA 5:24708595-25311977
CIL_000458 CIL_000458_0002 CGP 5:24802823-25100642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004679 TAS AMP-activated protein kinase activity
GO:0004862 IEA cAMP-dependent protein kinase inhibitor activity
GO:0005524 IEA ATP binding
GO:0005615 IEA extracellular space
GO:0005829 TAS cytosol
GO:0005977 IEA glycogen metabolic process
GO:0006110 IEA regulation of glycolytic process
GO:0006468 TAS protein phosphorylation
GO:0006469 IEA negative regulation of protein kinase activity
GO:0006633 IEA fatty acid biosynthetic process
GO:0008603 IEA cAMP-dependent protein kinase regulator activity
GO:0008607 IEA phosphorylase kinase regulator activity
GO:0010800 IEA positive regulation of peptidyl-threonine phosphorylation
GO:0016208 IEA AMP binding
GO:0019217 IEA regulation of fatty acid metabolic process
GO:0019901 IEA protein kinase binding
GO:0030295 IEA protein kinase activator activity
GO:0031588 IEA AMP-activated protein kinase complex
GO:0035556 IEA intracellular signal transduction
GO:0043531 IEA ADP binding
GO:0045860 IEA positive regulation of protein kinase activity
GO:0050790 IEA regulation of catalytic activity
GO:0071901 IEA negative regulation of protein serine/threonine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000129174 prkag2a-201 protein_coding Danio_rerio 0 647
ENSDART00000148618 prkag2a-001 protein_coding Danio_rerio 0 647
ENST00000287878 PRKAG2-001 protein_coding Homo_sapiens 0 2586
ENST00000392801 PRKAG2-003 protein_coding Homo_sapiens 0 2254
ENST00000418337 PRKAG2-002 protein_coding Homo_sapiens 0 1812
ENST00000461529 PRKAG2-008 processed_transcript Homo_sapiens 0 553
ENST00000476632 PRKAG2-010 protein_coding Homo_sapiens 0 721
ENST00000478989 PRKAG2-015 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000479461 PRKAG2-017 retained_intron Homo_sapiens 0 523
ENST00000481434 PRKAG2-005 retained_intron Homo_sapiens 0 789
ENST00000483775 PRKAG2-013 retained_intron Homo_sapiens 0 348
ENST00000485183 PRKAG2-016 retained_intron Homo_sapiens 0 327
ENST00000487375 PRKAG2-009 processed_transcript Homo_sapiens 0 191
ENST00000488258 PRKAG2-006 nonsense_mediated_decay Homo_sapiens 0 789
ENST00000491938 PRKAG2-014 retained_intron Homo_sapiens 0 490
ENST00000492843 PRKAG2-004 protein_coding Homo_sapiens 0 1978
ENST00000493872 PRKAG2-012 nonsense_mediated_decay Homo_sapiens 0 442

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