C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras homolog enriched in brain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030787 Rheb-001 ENSMUSG00000028945 10090 - 5:24802823-24842624 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030787
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030787 29.627±2.46 42.083±7.20 23.666±11.23 24.064±14.42 20.784±5.74 23.059±3.40 16.552±6.23 22.915±2.94 17.394±5.61 28.577±3.29 15.693±4.93 34.578±12.59 25.412±13.14 5.459±2.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RX CIL_0007RX_0002 VISTA 5:24430554-25031843
CIL_0007T7 CIL_0007T7_0002 VISTA 5:24699254-25303507
CIL_0007T1 CIL_0007T1_0002 VISTA 5:24708595-25311977
CIL_000457 CIL_000457_0002 CGP 5:24751003-24842624
CIL_000458 CIL_000458_0002 CGP 5:24802823-25100642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005525 IDA GTP binding
GO:0005681 IDA spliceosomal complex
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0019003 IEA GDP binding
GO:0019901 IPI protein kinase binding
GO:0030425 IEA dendrite
GO:0032008 IDA positive regulation of TOR signaling
GO:0043025 IEA neuronal cell body
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262187 RHEB-001 protein_coding Homo_sapiens 0 1711
ENST00000448647 RHEBP1-001 processed_pseudogene Homo_sapiens 0 793
ENST00000450289 RHEBP2-001 processed_pseudogene Homo_sapiens 0 822
ENST00000470072 RHEB-006 retained_intron Homo_sapiens 0 209
ENST00000470370 RHEB-007 protein_coding Homo_sapiens 0 462
ENST00000472642 RHEB-003 protein_coding Homo_sapiens 0 1055
ENST00000475914 FAM35BP-004 processed_transcript Homo_sapiens 0 302
ENST00000478470 RHEB-004 nonsense_mediated_decay Homo_sapiens 0 922
ENST00000496004 RHEB-002 protein_coding Homo_sapiens 0 734

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