C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and ubiquitin-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030799 Tmub1-001 ENSMUSG00000028958 10090 - 5:24445458-24447854 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030799
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030799 9.439±2.66 24.170±2.46 10.931±0.98 18.710±0.85 18.616±7.87 45.508±4.95 8.631±1.56 19.122±2.20 6.906±3.13 16.202±1.88 9.388±1.46 18.819±5.90 7.713±6.16 2.464±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0007RX CIL_0007RX_0002 VISTA 5:24430554-25031843
CIL_0004EQ CIL_0004EQ_0002 CGP 5:24438440-24447854
CIL_0003TG CIL_0003TG_0002 CGP 5:24445458-24502047

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297533 TMUB1-001 protein_coding Homo_sapiens 0 1101
ENST00000392818 TMUB1-002 protein_coding Homo_sapiens 0 1018
ENST00000462940 TMUB1-003 protein_coding Homo_sapiens 0 1018
ENST00000476627 TMUB1-005 protein_coding Homo_sapiens 0 887
ENST00000482202 TMUB1-004 protein_coding Homo_sapiens 0 887

Loading