C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: origin recognition complex, subunit 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030872 Orc5-001 ENSMUSG00000029012 10090 - 5:22486489-22550375 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030872
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030872 3.270±0.47 0.841±0.36 2.729±0.95 3.972±1.46 1.937±0.80 1.605±0.74 1.575±0.73 1.862±0.48 6.267±5.50 2.762±0.27 3.953±0.19 2.743±2.76 8.648±4.08 3.376±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040Z CIL_00040Z_0002 CGP 5:21884454-22550429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000808 IEA origin recognition complex
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005664 ISS nuclear origin of replication recognition complex
GO:0005737 IEA cytoplasm
GO:0006260 TAS DNA replication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297431 ORC5-001 protein_coding Homo_sapiens 0 2331
ENST00000422497 ORC5-002 nonsense_mediated_decay Homo_sapiens 0 2115
ENST00000447452 ORC5-006 protein_coding Homo_sapiens 0 1116
ENST00000448563 ORC5-003 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000463152 ORC5-005 processed_transcript Homo_sapiens 0 396
ENST00000477223 ORC5-007 retained_intron Homo_sapiens 0 435
ENST00000485726 ORC5-004 processed_transcript Homo_sapiens 0 861

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