C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TNFAIP3 interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030991 Tnip2-002 ENSMUSG00000059866 10090 - 5:34496087-34513963 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSMUST00000030991
Transcript ID Kidney
ENSMUST00000030991 0.809±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OC CIL_0003OC_0003 CGP 5:34369933-34513997
CIL_0003SI CIL_0003SI_0002 CGP 5:34496087-34563638

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007249 IDA I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315423 TNIP2-001 protein_coding Homo_sapiens 0 617
ENST00000424288 RP11-169L17.5-001 processed_pseudogene Homo_sapiens 0 483
ENST00000503235 TNIP2-003 protein_coding Homo_sapiens 3e-20 104
ENST00000505186 TNIP2-006 processed_transcript Homo_sapiens 0 617
ENST00000507686 TNIP2-005 retained_intron Homo_sapiens 9e-21 104
ENST00000510267 TNIP2-002 protein_coding Homo_sapiens 0 617

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