C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collapsin response mediator protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031004 Crmp1-201 ENSMUSG00000029121 10090 + 5:37245792-37292132 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031004
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031004 0.431±0.31 0.827±0.43 0.161±0.00 145.427±72.71 0.468±0.18 0.479±0.15 0.218±0.02 0.175±0.07 0.220±0.19 0.118±0.04 0.022±0.01 0.446±0.12 0.438±0.31 0.450±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006208 IEA pyrimidine nucleobase catabolic process
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0030425 IDA dendrite
GO:0043025 IDA neuronal cell body
GO:0051219 IPI phosphoprotein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000146517 dpysl2b-001 protein_coding Danio_rerio 0 457
ENST00000324989 CRMP1-001 protein_coding Homo_sapiens 0 2551
ENST00000338492 DPYSL4-001 protein_coding Homo_sapiens 0 569
ENST00000368627 DPYSL4-004 protein_coding Homo_sapiens 0 298
ENST00000397890 CRMP1-003 protein_coding Homo_sapiens 0 2671
ENST00000506216 CRMP1-005 processed_transcript Homo_sapiens 0 1670
ENST00000511535 CRMP1-004 processed_transcript Homo_sapiens 0 2551
ENST00000512574 CRMP1-002 protein_coding Homo_sapiens 0 2362
ENST00000513911 CRMP1-006 processed_transcript Homo_sapiens 0 815

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