C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribokinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031018 Rbks-001 ENSMUSG00000029136 10090 - 5:31624439-31697627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031018
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031018 2.385±0.65 3.693±0.85 1.752±0.27 0.824±0.54 1.877±0.80 5.820±0.40 1.088±0.36 9.074±0.59 8.912±1.80 2.566±0.30 1.151±0.25 1.750±0.61 4.499±1.51 8.873±3.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013J CIL_00013J_0002 CGP 5:31526995-31701972
CIL_00013K CIL_00013K_0002 CGP 5:31596935-31701972
CIL_0003JP CIL_0003JP_0003 CGP 5:31624439-32084962

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004747 IEA ribokinase activity
GO:0005524 IEA ATP binding
GO:0019303 IEA D-ribose catabolic process
GO:0046835 IEA carbohydrate phosphorylation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302188 RBKS-001 protein_coding Homo_sapiens 0 1044
ENST00000449378 RBKS-002 nonsense_mediated_decay Homo_sapiens 0 952
ENST00000453412 RBKS-003 nonsense_mediated_decay Homo_sapiens 4e-25 119
ENST00000458185 RBKS-004 protein_coding Homo_sapiens 0 307

Loading