C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032841 Mrpl46-001 ENSMUSG00000030612 10090 - 7:78775236-78783066 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032841
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032841 10.638±1.25 29.092±2.36 9.617±0.75 13.784±2.74 11.141±2.79 20.225±4.88 18.021±2.55 25.055±1.96 19.279±5.31 12.320±1.24 13.034±0.36 17.733±2.26 31.222±17.84 9.725±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AZ CIL_0001AZ_0002 CGP 7:78192362-78783531
CIL_00011G CIL_00011G_0002 CGP 7:78775236-78792989

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312475 MRPL46-001 protein_coding Homo_sapiens 0 771
ENST00000558531 MRPL46-005 protein_coding Homo_sapiens 0 324
ENST00000558660 MRPL46-002 retained_intron Homo_sapiens 0 320
ENST00000559538 MRPL46-003 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000560703 MRPL46-004 nonsense_mediated_decay Homo_sapiens 0 414

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