C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spinster homolog 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032994 Spns1-001 ENSMUSG00000030741 10090 - 7:126370060-126377450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032994
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032994 19.092±1.84 26.516±2.74 16.403±2.38 18.366±9.64 19.074±0.72 23.270±2.22 11.048±1.95 26.625±3.66 12.010±1.96 30.250±4.96 12.915±1.00 24.021±6.33 11.975±8.65 3.854±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AT CIL_0005AT_0002 CGP 7:126370060-126396737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005743 IEA mitochondrial inner membrane
GO:0005765 IEA lysosomal membrane
GO:0006869 IEA lipid transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311008 SPNS1-001 protein_coding Homo_sapiens 0 1951
ENST00000323081 SPNS1-002 protein_coding Homo_sapiens 0 1871
ENST00000334536 SPNS1-006 protein_coding Homo_sapiens 0 1018
ENST00000352260 SPNS1-005 protein_coding Homo_sapiens 0 760
ENST00000561868 SPNS1-010 processed_transcript Homo_sapiens 0 477
ENST00000564476 SPNS1-012 protein_coding Homo_sapiens 0 758
ENST00000565975 SPNS1-003 protein_coding Homo_sapiens 0 1953
ENST00000566059 SPNS1-007 protein_coding Homo_sapiens 0 1469
ENST00000567771 SPNS1-008 protein_coding Homo_sapiens 0 678
ENST00000568388 SPNS1-009 protein_coding Homo_sapiens 0 747
ENST00000568829 SPNS1-011 protein_coding Homo_sapiens 0 531
ENST00000568900 SPNS1-004 retained_intron Homo_sapiens 0 846

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