C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arrestin, beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032995 Arrb1-002 ENSMUSG00000018909 10090 + 7:99535662-99603574 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000032995
Transcript ID Ovary Placenta Testis
ENSMUST00000032995 3.072±1.32 3.342±0.44 2.911±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0002 VISTA 7:99059661-99661402
CIL_0008I3 CIL_0008I3_0002 VISTA 7:99464975-100069320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001934 ISS positive regulation of protein phosphorylation
GO:0002092 ISS positive regulation of receptor internalization
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0005905 IEA coated pit
GO:0007602 IMP phototransduction
GO:0008277 IMP regulation of G-protein coupled receptor protein signaling pathway
GO:0015031 IEA protein transport
GO:0031143 IDA pseudopodium
GO:0031434 IDA mitogen-activated protein kinase kinase binding
GO:0032092 IMP positive regulation of protein binding
GO:0033138 IMP positive regulation of peptidyl-serine phosphorylation
GO:0035774 IMP positive regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0043027 IMP cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043154 IMP negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0070374 IMP positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360025 ARRB1-002 protein_coding Homo_sapiens 0 1858
ENST00000420843 ARRB1-001 protein_coding Homo_sapiens 0 1759
ENST00000524400 ARRB1-004 nonsense_mediated_decay Homo_sapiens 0 634
ENST00000527385 ARRB1-007 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000529280 ARRB1-009 retained_intron Homo_sapiens 0 374
ENST00000532447 ARRB1-012 protein_coding Homo_sapiens 0 676
ENST00000532525 ARRB1-006 protein_coding Homo_sapiens 0 989
ENST00000533255 ARRB1-008 retained_intron Homo_sapiens 0 621
ENST00000533609 ARRB1-005 nonsense_mediated_decay Homo_sapiens 0 630

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