C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cDNA sequence BC017158
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033044 BC017158-001 ENSMUSG00000030780 10090 - 7:128271379-128298170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033044
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033044 17.068±4.25 15.610±5.82 9.588±0.26 6.072±0.16 11.268±4.26 21.451±2.51 2.737±0.88 52.238±0.00 9.573±2.24 14.657±2.28 0.707±0.22 18.766±8.43 6.249±2.12 3.357±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000708 CIL_000708_0002 CGP 7:128246812-128272430
CIL_00035J CIL_00035J_0002 CGP 7:128265657-128298170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327237 C16orf58-001 protein_coding Homo_sapiens 0 1391
ENST00000430477 C16orf58-201 protein_coding Homo_sapiens 0 1391
ENST00000541442 C16orf58-005 retained_intron Homo_sapiens 0 375
ENST00000564807 C16orf58-007 protein_coding Homo_sapiens 0 481
ENST00000566148 C16orf58-010 retained_intron Homo_sapiens 0 508
ENST00000567578 C16orf58-009 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000567994 C16orf58-002 protein_coding Homo_sapiens 0 1323
ENST00000568491 C16orf58-006 retained_intron Homo_sapiens 0 401
ENST00000570164 C16orf58-004 protein_coding Homo_sapiens 0 1363

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