C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integral membrane protein 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033591 Itm2a-001 ENSMUSG00000031239 10090 - X:107397099-107403376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033591
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033591 19.244±9.40 4.518±1.40 46.565±4.15 23.143±12.32 59.991±2.36 3.525±0.37 6.712±0.39 3.217±0.78 24.295±26.43 12.934±0.65 42.074±2.79 34.483±9.04 67.590±31.06 1.204±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000C2 CIL_0000C2_0002 CGP X:107255878-107403376
CIL_0003KD CIL_0003KD_0002 CGP X:107397099-107688978

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373298 ITM2A-001 protein_coding Homo_sapiens 0 1303
ENST00000434584 ITM2A-201 protein_coding Homo_sapiens 0 929
ENST00000461357 ITM2A-005 processed_transcript Homo_sapiens 0 191
ENST00000462038 ITM2A-003 processed_transcript Homo_sapiens 0 187
ENST00000469541 ITM2A-002 processed_transcript Homo_sapiens 0 976
ENST00000482194 ITM2A-004 processed_transcript Homo_sapiens 0 198

Loading