C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centromere protein U
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034045 Cenpu-001 ENSMUSG00000031629 10090 + 8:46552060-46579584 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverOvaryPlacentaTestisENSMUST00000034045
Transcript ID Brain Colon Liver Ovary Placenta Testis
ENSMUST00000034045 1.250±0.00 0.465±0.10 2.428±1.28 0.368±0.01 1.675±0.24 8.470±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097G CIL_00097G_0002 VISTA 8:46470571-47072246
CIL_00094W CIL_00094W_0002 VISTA 8:46548055-47151393

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005815 IEA microtubule organizing center
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043009 IMP chordate embryonic development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281453 CENPU-001 protein_coding Homo_sapiens 0 451
ENST00000502461 CENPU-005 retained_intron Homo_sapiens 0 261
ENST00000508095 CENPU-006 retained_intron Homo_sapiens 0 322
ENST00000510146 CENPU-003 nonsense_mediated_decay Homo_sapiens 0 261

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