C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase long-chain family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034046 Acsl1-001 ENSMUSG00000018796 10090 + 8:46471041-46536051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000034046
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000034046 214.238±70.45 100.875±27.40 16.075±3.04 3.882±0.25 176.272±25.93 7.139±1.63 77.706±2.43 58.557±2.27 126.380±74.46 21.194±2.84 52.910±4.07 19.683±17.02 9.629±7.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097G CIL_00097G_0002 VISTA 8:46470571-47072246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001676 IEA long-chain fatty acid metabolic process
GO:0004467 IEA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005778 IEA peroxisomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0006631 IEA fatty acid metabolic process
GO:0006641 IEA triglyceride metabolic process
GO:0007584 IEA response to nutrient
GO:0008610 IEA lipid biosynthetic process
GO:0010033 IEA response to organic substance
GO:0014070 IEA response to organic cyclic compound
GO:0015908 IEA fatty acid transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0033211 IMP adiponectin-activated signaling pathway
GO:0034201 IEA response to oleic acid
GO:0042178 IEA xenobiotic catabolic process
GO:0042493 IEA response to drug
GO:0044539 IEA long-chain fatty acid import
GO:0071902 IMP positive regulation of protein serine/threonine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281455 ACSL1-001 protein_coding Homo_sapiens 0 2514
ENST00000296869 ACSL6-009 protein_coding Homo_sapiens 0 320
ENST00000357096 ACSL6-201 protein_coding Homo_sapiens 0 320
ENST00000379240 ACSL6-004 protein_coding Homo_sapiens 0 320
ENST00000379244 ACSL6-008 protein_coding Homo_sapiens 0 320
ENST00000379246 ACSL6-002 protein_coding Homo_sapiens 0 320
ENST00000379255 ACSL6-003 protein_coding Homo_sapiens 0 320
ENST00000379264 ACSL6-001 protein_coding Homo_sapiens 0 320
ENST00000413683 ACSL6-006 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000431707 ACSL6-018 protein_coding Homo_sapiens 0 320
ENST00000454703 ACSL1-005 protein_coding Homo_sapiens 0 2230
ENST00000493861 ACSL6-010 retained_intron Homo_sapiens 0 320
ENST00000503407 ACSL1-009 protein_coding Homo_sapiens 0 822
ENST00000504342 ACSL1-002 protein_coding Homo_sapiens 0 2254
ENST00000504900 ACSL1-004 protein_coding Homo_sapiens 0 1232
ENST00000505492 ACSL1-008 protein_coding Homo_sapiens 1.96182e-44 182
ENST00000506733 ACSL1-003 nonsense_mediated_decay Homo_sapiens 0 1975
ENST00000507295 ACSL1-006 protein_coding Homo_sapiens 0 1914
ENST00000513001 ACSL1-010 retained_intron Homo_sapiens 0 544
ENST00000513317 ACSL1-007 protein_coding Homo_sapiens 0 2130
ENST00000515030 ACSL1-011 protein_coding Homo_sapiens 0 2449
ENST00000543479 ACSL6-202 protein_coding Homo_sapiens 0 320
ENST00000622937 ACSL1-201 protein_coding Homo_sapiens 0 2156

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