C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEDD4 binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034074 N4bp1-201 ENSMUSG00000031652 10090 - 8:86841139-86885258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034074
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034074 4.497±2.27 9.126±2.69 3.938±0.62 5.539±1.21 4.367±1.75 7.537±1.16 2.571±0.65 4.628±1.07 2.532±0.59 6.156±1.11 3.966±1.47 8.890±2.16 3.584±1.47 2.491±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008F8 CIL_0008F8_0002 VISTA 8:86820551-87422269
CIL_0002VO CIL_0002VO_0002 CGP 8:86841139-87472592

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0016605 IDA PML body
GO:0031397 IDA negative regulation of protein ubiquitination
GO:0032435 IDA negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034644 IMP cellular response to UV

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262384 N4BP1-001 protein_coding Homo_sapiens 0 2597
ENST00000564124 N4BP1-002 retained_intron Homo_sapiens 0 1938
ENST00000565423 N4BP1-005 processed_transcript Homo_sapiens 0 233
ENST00000565638 N4BP1-004 processed_transcript Homo_sapiens 0 230
ENST00000569027 N4BP1-003 retained_intron Homo_sapiens 0 207

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