C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin light chain kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034133 Mylk3-001 ENSMUSG00000031698 10090 - 8:85324303-85365324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000034133
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000034133 0.068±0.00 0.006±0.00 0.052±0.03 43.965±13.27 0.084±0.02 2.147±0.84 0.667±0.15 0.080±0.00 0.904±0.71 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044W CIL_00044W_0003 CGP 8:85299632-85386345
CIL_00044Z CIL_00044Z_0003 CGP 8:85324303-85432841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002528 IEA regulation of vascular permeability involved in acute inflammatory response
GO:0004683 IDA calmodulin-dependent protein kinase activity
GO:0004687 IDA myosin light chain kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0006468 IDA protein phosphorylation
GO:0015629 IDA actin cytoskeleton
GO:0045214 IDA sarcomere organization
GO:0048769 IEA sarcomerogenesis
GO:0055003 IEA cardiac myofibril assembly
GO:0060298 IEA positive regulation of sarcomere organization
GO:0071347 IEA cellular response to interleukin-1

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394809 MYLK3-001 protein_coding Homo_sapiens 0 1275
ENST00000536476 MYLK3-003 protein_coding Homo_sapiens 0 1258
ENST00000564731 MYLK3-002 retained_intron Homo_sapiens 0 558
ENST00000569844 MYLK3-005 retained_intron Homo_sapiens 0 422

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