C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: component of oligomeric golgi complex 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034391 Cog8-001 ENSMUSG00000031916 10090 - 8:107046295-107056684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034391
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034391 7.905±0.56 7.457±0.57 10.994±0.08 17.563±0.00 4.679±1.45 6.060±0.91 6.242±1.78 6.019±0.00 9.683±0.63 10.860±0.32 8.050±3.16 26.536±4.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KB CIL_0008KB_0002 VISTA 8:107038845-107639359
CIL_0004IA CIL_0004IA_0002 CGP 8:107044698-107056689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017119 IEA Golgi transport complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306875 COG8-001 protein_coding Homo_sapiens 0 1988
ENST00000562081 COG8-003 protein_coding Homo_sapiens 0 1871
ENST00000562595 COG8-006 protein_coding Homo_sapiens 0 671
ENST00000563634 RP11-343C2.9-001 protein_coding Homo_sapiens 0 568
ENST00000564737 RP11-343C2.7-001 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000567493 COG8-002 protein_coding Homo_sapiens 0 416
ENST00000570293 RP11-343C2.7-002 nonsense_mediated_decay Homo_sapiens 0 337

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