C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceronephosphate O-acyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034466 Gnpat-001 ENSMUSG00000031985 10090 + 8:124863033-124890057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034466
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034466 68.798±23.64 28.808±3.55 26.606±3.04 17.537±6.53 50.949±6.03 13.540±1.01 56.459±3.02 23.960±1.92 14.993±2.98 22.842±0.80 55.009±2.26 20.775±5.43 16.158±4.35 82.286±32.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0002 VISTA 8:124343702-124945898
CIL_0006B2 CIL_0006B2_0002 CGP 8:124839355-124890057
CIL_0006B5 CIL_0006B5_0002 CGP 8:124863033-124897705

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IDA catalytic activity
GO:0005102 IEA receptor binding
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005777 IEA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0005782 TAS peroxisomal matrix
GO:0006650 IEA glycerophospholipid metabolic process
GO:0007416 IMP synapse assembly
GO:0007584 IEA response to nutrient
GO:0008611 TAS ether lipid biosynthetic process
GO:0016020 IEA membrane
GO:0016287 IDA glycerone-phosphate O-acyltransferase activity
GO:0016290 IEA palmitoyl-CoA hydrolase activity
GO:0021587 IMP cerebellum morphogenesis
GO:0030913 IMP paranodal junction assembly
GO:0042493 IEA response to drug
GO:0042552 IMP myelination
GO:0042594 IEA response to starvation
GO:0061024 IMP membrane organization
GO:0070542 IEA response to fatty acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366647 GNPAT-001 protein_coding Homo_sapiens 0 1700
ENST00000416000 GNPAT-002 protein_coding Homo_sapiens 0 1166
ENST00000436239 GNPAT-003 protein_coding Homo_sapiens 0 586
ENST00000567548 GNPATP-001 processed_pseudogene Homo_sapiens 0 361

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