C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: egl-9 family hypoxia-inducible factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034469 Egln1-201 ENSMUSG00000031987 10090 - 8:124908596-124949254 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034469
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034469 22.740±2.63 13.717±5.47 20.519±1.22 14.734±7.93 20.494±3.73 14.841±4.29 81.989±6.19 21.366±1.78 7.442±1.77 21.961±2.42 78.438±2.70 19.512±6.67 9.105±2.56 2.041±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0002 VISTA 8:124343702-124945898
CIL_0006AZ CIL_0006AZ_0002 CGP 8:124897886-124949254
CIL_0006AY CIL_0006AY_0002 CGP 8:124908596-125034192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0005506 IEA iron ion binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0018401 IEA peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0019899 IEA enzyme binding
GO:0030821 IEA negative regulation of cAMP catabolic process
GO:0031418 IEA L-ascorbic acid binding
GO:0031543 IEA peptidyl-proline dioxygenase activity
GO:0031545 IEA peptidyl-proline 4-dioxygenase activity
GO:0032364 IEA oxygen homeostasis
GO:0043433 IEA negative regulation of sequence-specific DNA binding transcription factor activity
GO:0045765 IMP regulation of angiogenesis
GO:0051344 IEA negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0055008 IMP cardiac muscle tissue morphogenesis
GO:0055114 IEA oxidation-reduction process
GO:0060347 IMP heart trabecula formation
GO:0060412 IMP ventricular septum morphogenesis
GO:0060711 IMP labyrinthine layer development
GO:0071731 ISS response to nitric oxide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366641 EGLN1-001 protein_coding Homo_sapiens 0 1072
ENST00000427525 SCAND2P-002 processed_transcript Homo_sapiens 0 460
ENST00000476717 EGLN1-002 processed_transcript Homo_sapiens 0 551
ENST00000531623 EGLN1P1-001 transcribed_processed_pseudogene Homo_sapiens 0 433
ENST00000558612 SCAND2P-008 processed_transcript Homo_sapiens 0 209

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