C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034612 Ddx25-001 ENSMUSG00000032101 10090 - 9:35541847-35558528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034612
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034612 0.139±0.02 0.739±0.21 0.026±0.01 20.846±4.21 0.112±0.05 0.135±0.05 0.078±0.05 0.065±0.03 0.228±0.18 0.069±0.02 0.114±0.00 0.424±0.21 0.744±0.35 147.200±39.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0002 VISTA 9:35123876-35727017

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004004 IDA ATP-dependent RNA helicase activity
GO:0005524 IDA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006200 IDA ATP catabolic process
GO:0006406 IDA mRNA export from nucleus
GO:0006417 IDA regulation of translation
GO:0007275 IEA multicellular organismal development
GO:0007286 IDA spermatid development
GO:0033391 IDA chromatoid body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263576 DDX25-001 protein_coding Homo_sapiens 0 1753
ENST00000525943 DDX25-002 processed_transcript Homo_sapiens 0 1613
ENST00000526875 DDX25-004 protein_coding Homo_sapiens 0 944
ENST00000530129 DDX25-005 protein_coding Homo_sapiens 0 508
ENST00000530414 DDX25-003 protein_coding Homo_sapiens 0 1642

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