C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 1, subfamily a, polypeptide 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034860 Cyp1a2-201 ENSMUSG00000032310 10090 - 9:57676937-57683655 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034860 0.044±0.01 0.124±0.06 0.004±0.00 0.008±0.00 1.517±0.31 0.081±0.05 0.147±0.05 0.042±0.02 258.289±258.59 0.180±0.08 0.049±0.02 0.211±0.11 0.024±0.01 0.144±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0002 VISTA 9:57506610-58107834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0006706 IEA steroid catabolic process
GO:0006725 IMP cellular aromatic compound metabolic process
GO:0006778 IMP porphyrin-containing compound metabolic process
GO:0009403 IEA toxin biosynthetic process
GO:0009404 IMP toxin metabolic process
GO:0009791 IMP post-embryonic development
GO:0009820 IEA alkaloid metabolic process
GO:0010033 IEA response to organic substance
GO:0010468 IMP regulation of gene expression
GO:0014070 IEA response to organic cyclic compound
GO:0016020 IEA membrane
GO:0016098 IEA monoterpenoid metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0016712 IDA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
GO:0017144 IMP drug metabolic process
GO:0018894 IMP dibenzo-p-dioxin metabolic process
GO:0019899 IEA enzyme binding
GO:0020037 ISS heme binding
GO:0030324 IMP lung development
GO:0032355 IEA response to estradiol
GO:0032451 IEA demethylase activity
GO:0032496 IEA response to lipopolysaccharide
GO:0032787 IEA monocarboxylic acid metabolic process
GO:0034875 IEA caffeine oxidase activity
GO:0035902 IEA response to immobilization stress
GO:0042493 IEA response to drug
GO:0042737 IEA drug catabolic process
GO:0042738 IEA exogenous drug catabolic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045333 IMP cellular respiration
GO:0046483 IEA heterocycle metabolic process
GO:0050665 IMP hydrogen peroxide biosynthetic process
GO:0070330 IEA aromatase activity
GO:0070989 IEA oxidative demethylation
GO:0071276 IDA cellular response to cadmium ion
GO:0071615 IEA oxidative deethylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343932 CYP1A2-001 protein_coding Homo_sapiens 0 1168
ENST00000379727 CYP1A1-001 protein_coding Homo_sapiens 0 492
ENST00000395048 CYP1A1-201 protein_coding Homo_sapiens 0 492
ENST00000395049 CYP1A1-003 protein_coding Homo_sapiens 0 492
ENST00000562201 CYP1A1-007 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000564596 CYP1A1-004 protein_coding Homo_sapiens 0 231
ENST00000566503 CYP1A1-006 protein_coding Homo_sapiens 0 239
ENST00000567032 CYP1A1-002 protein_coding Homo_sapiens 0 492
ENST00000569630 CYP1A1-005 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000612821 CYP1A1-202 protein_coding Homo_sapiens 0 492
ENST00000617691 CYP1A1-203 protein_coding Homo_sapiens 0 492

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